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IREAP Publications - 2012

  1. Anderson, Dustin, Ari Tenzer, Gilad Barlev, Michelle Girvan, Thomas M. Antonsen, and Edward Ott, "Multiscale Dynamics in Communities of Phase Oscillators," Chaos 22, 013102 (2012), doi: 10.1063/1.3672513.
  2. Armani, Mike, Zach Cummins, Jian Gong, Pramod Mathai, Roland Probst, Chap Ropp, Edo Waks, Shawn Walker, and Benjamin Shapiro, "Feedback Control of Microflows," Feedback Control of Mems to Atoms, pg. 269 (2012), doi: 10.1007/978-1-4419-5832-7_9.
  3. Bhanja, Urmila, Sudipta Mahapatra, and Rajarshi Roy, "FWM Aware Evolutionary Programming Algorithm for Transparent Optical Networks," Photonic Network Commun. 23, 285 (2012), doi: 10.1007/s11107-011-0359-2.
  4. Bose, Ranojoy, Tao Cai, Glenn S. Solomon, and Edo Waks, "All-Optical Tuning of a Quantum Dot in a Coupled Cavity System," Appl. Phys. Lett. 100, 231107 (2012), doi: 10.1063/1.4719065.
  5. Bose, Ranojoy, Deepak Sridharan, Hyochul Kim, Glenn S. Solomon, and Edo Waks, "Low-Photon-Number Optical Switching with a Single Quantum Dot Coupled to a Photonic Crystal Cavity," Phys. Rev. Lett. 108, 227402 (2012), doi: 10.1103/PhysRevLett.108.227402.
  6. Chauhan, Sanjeev, Michelle Girvan, and Edward Ott, "A Network Function-Based Definition of Communities in Complex Networks," Chaos 22, 033129 (2012), doi: 10.1063/1.4745854.
  7. Li-Bo Chen, L.J. Sham, and Edo Waks, "Optically Controlled Phase Gate for Two Spin Qubits in Coupled Quantum Dots," Phys. Rev. B 85, 115319 (2012), doi: 10.1103/PhysRevB.85.115319.
  8. Cornett, Jane E. and Oded Rabin, "Effect of the Energy Dependence of the Carrier Scattering Time on the Thermoelecric Power Factor of Quantum Wells and Nanowires," Appl. Phys. Lett. 100, 242106 (2012), doi: 10.1063/1.4729381.
  9. Denton, R.E., B.U.Oe. Sonnerup, M. Swisdak, J. Birn, J.F. Drake, and M. Hesse, "Test of Shi et al. Method to Infer the Magnetic Reconnection Geometry from Spacecraft Data: MHD Simulation with Guide Field and Antiparallel Kinetic Simulation," J. Geophys. Res.-Space Phys. 117, A09201 (2012), doi: 10.1029/2012JA017877.
  10. Drake, J.F. and M. Swisdak, "Ion Heating and Acceleration during Magnetic Reconnection Relevant to the Corona," Space Sci. Rev. 172, 227 (2012), doi: 10.1007/s11214-012-9903-3.
  11. Fermo, R.L., J.F. Drake, and M. Swisdak, "Secondary Magnetic Islands Generated by the Kelvin-Helmholtz Instability in a Reconnecting Current Sheet," Phys. Rev. Lett. 108, 255005 (2012), doi: 10.1103/PhysRevLett.108.255005.
  12. Fonda, Enrico, Katepalli R. Sreenivasan, and Daniel P. Lathrop, "Liquid Nitrogen in Fluid Dynamics:  Visualization and Velocimetry Using  Frozen Particles," Rev. Sci. Instrum. 83, 085101 (2012), doi: 10.1063/1.4739837.
  13. Gradoni, Gabriele, Thomas M. Antonsen, Jr., and Edward Ott, "Impedance and Power Fluctuations in Linear Chains of Coupled Wave Chaotic Cavities," Phys. Rev. E 86, 046204 (2012), doi: 10.1103/PhysRevE.86.046204.
  14. Glass, Kimberly, Edward Ott, Wolfgang Losert, and Michelle Girvan, "Implications of Functional Similarity for Gene Regulatory Interactions," J. Roy. Soc. Inter. 9, 1625 (2012), doi: 10.1098/rsif.2011.0585.
  15. Hagerstrom, Aaron M., Thomas E. Murphy, Rajarshi Roy, Philipp Hoevel, Iryna Omelchenko, and Eckehard Schöell, "Experimental Observation of Chimeras in Coupled-Map Lattices," Nature Phys. 8, 658 (2012), doi: 10.1038/NPHYS2372.
  16. Han, Yong, Gregory S. Nusinovich, Thomas M. Antonsen, Jr., John Rodgers, and Oleksandr V. Sinitsyn, "Axially Periodic Dielectric-Loaded Circular Waveguide for Microwave/Millimeter-Wave Devices," IEEE Trans. Plasma Sci. 40, 3420 (2012), doi: 10.1109/TPS.2012.2223236.
  17. Hemmady, Sameer, Thomas M. Antonsen, Jr., Edward Ott, and Steven M. Anlage, "Statistical Prediction and Measurement of Induced Voltages on Components within Complicated Enclosures:  A Wave-Chaotic Approach," IEEE Trans. Electromagnetic Compatibility 54, 758 (2012), doi: 10.1109/TEMC.2011.2177270.
  18. Holloway, Michael A., Zeynep Dilli, Nuttiiya Seekhao, and John C. Rodgers, "Study of Basic Effects of HPM Pulses in Digital CMOS Integrated Circuit Inputs," IEEE Trans. Electromagnetic Compatibility 54, 1017 (2012), doi: 10.1109/TEMC.2012.2188720.
  19. Khan, Saara A., Eric J. Montgomery, Blake C. Riddick, and Patrick O'Shea, "Fabrication and Characterization of Cesium-Based Photocathodes for Free Electron Lasers," J. Vac. Sci. Technol. B 39, 031207 (2012), doi: 10.1116/1.3696731.
  20. Kim, Ki-Yong, James H. Glownia, Antoinette J. Taylor, and George Rodriguez, "High-Power Broadband Terahertz Generation via Two-Color Photoionization in Gases," IEEE J. Quant. Electron. 48, 797 (2012), doi: 10.1109/JQE.2012.2190586.
  21. Ku, Wai Lim, Geet Duggal, Yuan Li, Michelle Girvan, and Edward Ott, "Interpreting Patterns of Gene Expression: Signatures of Coregulation, the Data Processing Inequality, and Triplet Motifs," PLOS One 7, e31969 (2012), doi: 10.1371/journal.pone.0031969.
  22. Larremore, Daniel B., Marshall Y. Carpenter, Edward Ott, and Juan G. Restrepo, "Statistical Properties of Avalanches in Networks," Phys. Rev. E 85, 066131 (2012), doi: 10.1103/PhysRevE.85.066131.
  23. Lee, Ming-Jer, Thomas M. Antonsen, Edward Ott, and Louis M. Pecora, "Theory of Chaos Regularization of Tunneling in Chaotic Quantum Dots," Phys. Rev. E 86, 056212 (2012), doi: 10.1103/PhysRevE.86.056212.
  24. Lee, Seung Yong and Oded Rabin, "A Unique Solid-Solid Transformation of Silver Nanoparticles on Reactive Ion-Etching-Processed Silicon," Nanotechnol. 23, 065301 (2012), doi: 10.1088/0957-4484/23/6/065301.
  25. Li, T.C., J.F. Drake, and M. Swisdak, "Suppression of Energetic Electron Transport in Flares by Double Layers," Astrophys. J. 757, 20 (2012), doi: 10.1088/0004-637X/757/1/20.
  26. Liu, Yi-Hsin, J.F. Drake, and M. Swisdak, "The Structure of the Magnetic Reconnection Exhaust Boundary," Phys. Plasmas 19, 022110 (2012), doi: 10.1063/1.3685755.
  27. Markunas, Justin K., Peter J. Smith, and John Melngailis, "Hot Embossing of Thick Amorphous Fluoropolymer for Back End Processing of Infrared Arrays," J. Vac. Sci. Technol. B 30, 061601 (2012), doi: 10.1116/1.4757287.
  28. Masters, A., J.P. Eastwood, M. Swisdak, M.F. Thomsen, C.T. Russell, N. Sergis, F.J. Crary, M.K. Dougherty, A.J. Coates, and S.M. Krimigis, "The Importance of Plasma β Conditions for Magnetic Reconnection at Saturn's Magnetopause," Geophys. Res. Lett. 39, L08103 (2012), doi: 10.1029/2012GL051372.
  29. Mecholsky, Nicholas A., Edward Ott, Thomas M. Antonsen, Jr., and Parvez Guzdar, "Continuum Modeling of the Equilibrium and Stability of Animal Flocks," Phys. D - Nonlinear Phenomena 241, 472 (2012), doi: 10.1016/j.physd.2011.11.002.
  30. Murphy, Thomas E. and Halil Berberoglu, "Temperature Fluctuation and Evaporative Loss Rate in an Algae Biofilm Photobioreactor," J. Solar Energy Eng. 134, 011002 (2012), doi: 10.1115/1.4005088.
  31. Odhner, J.H., D.A. Romanov, E.T. McCole, J.K. Wahlstrand, H.M. Milchberg, and R.J. Levis, "Ionization-Grating-Induced Nonlinear Phase Accumulation in Spectrally Resolved Transient Birefringence Measurements at 400 nm," Phys. Rev. Lett. 109, 065003 (2012), doi: 10.1103/PhysRevLett.109.065003.
  32. Probst, Roland, Zachary Cummins, Chad Ropp, Edo Waks, and Benjamin Shapiro, "Flow Control of Small Objects on Chip Manipulating Live  Cells, Quantum Dots, and Nanowires," IEEE Control Systems Mag. 32, 26 (2012), doi: 10.1109/MCS.2011.2181584.
  33. Rabin, Oded, "Self-Assembly Judging a Nanocube by Its Cover," Nature Nanotechnol. 7, 419 (2012), doi: 10.1038/nnano.2012.113.
  34. Rabin, Oded and Seung Yong Lee, "SERS Substrates by the Assembly of Silver Nanocubes:  High-Throughput and Enhancement Reliability Considerations," J. Nanotechnol. 2012, 870378 (2012), doi: 10.1155/2012/870378.
  35. Rieutord, Michel, Santiago Andrés Triana, Daniel S. Zimmerman, and Daniel P. Lathrop, "Excitation of Inertial Modes in an Experimental Spherical Couette Flow," Phys. Rev. E  86, 026304 (2012), doi: 10.1103/PhysRevE.86.026304.
  36. Rowley, J.D., J.K. Wahlstrand, K.T. Zawilski, P.G. Schunemann, N.C. Giles, and A. Bristow, "Terahertz Generation by Optical Rectification in Uniaxial Birefringent Crystals," Optics Exp. 20, 16968 (2012), doi: 10.1364/OE.20.016968.
  37. Schoeffler, K.M., J.F. Drake, and M. Swisdak, "Scaling of the Growth Rate of Magnetic Islands in the Heliosheath," Astrophys. J. Lett. 750, L30 (2012), doi: 10.1088/2041-8205/750/2/L30.
  38. Sitnov, M.I. and M. Swisdak, "Onset of Collision Magnetic Reconnection in Two-Dimensional Current Sheets and Formation of Dipolarization Fronts (Vol. 116, A12216, 2011)," J. Geophys. Res. - Space Phys. 117, A02206 (2012), doi: 10.1029/2012JA017541.
  39. Squires, Shane, Edward Ott, and Michelle Girvan, "Dynamical Instability in Boolean Networks as a Percolation Problem," Phys. Rev. 109, 085701 (2012), doi: 10.1103/PhysRevLett.109.085701.
  40. Tadjer, Marko J., Travis J. Anderson, Karl  D. Hobart, Tatyana I. Feygelson, Joshua D. Caldwell, Charles R. Eddy, Jr., Fritz J. Kub, James E. Butler, Bradford Pate, and John Melngailis, "Reduced Self-Heating in AlGaN/GaN HEMTs Using Nanocrystalline Diamond Heat-Spreading Films," IEEE Electron Device Lett. 33, 23 (2012), doi: 10.1109/LED.2011.2171031.
  41. Vlasov, Alexander N., Thomas M. Antonsen, Jr., Igor A. Chernyavskiy, David P. Chernin, and Baruch Levush, "A Computationally Efficient Two-Dimensional Model of the Beam-Wave Interaction in a Coupled-Cavity TWT," IEEE Trans. Plasma Sci. 40, 1575 (2012), doi: 10.1109/TPS.2012.2188547.
  42. Wahlstrand, Jared K., Yu-Shin Chen, Yu-Hsiang Cheng, Sanjay R. Varma, and Howard M. Milchberg, "Measurements of the High Field Optical Nonlinearity and Electron Density in Gases:  Application to Filamentation Experiments," IEEE J. Quantum Electron. 48, 760 (2012), doi: 10.1109/JQE.2012.2187881.
  43. Wahlstand, J.K., Y.-H. Cheng, and H.M. Milchberg, "Absolute Measurement of the Transient Optical Nonlinearity in N2, O2, and N2O, and Ar," Phys. Rev. A 85, 043820 (2012), doi: 10.1103/PhysRevA.85.043820.
  44. Wathen, Jeremiah J., Vincent R. Pagán, and Thomas E. Murphy, "Simple Method to Characterize Nonlinear Refraction and Loss in Optical Waveguides," Optics Lett. 37, 4693 (2012), doi: 10.1364/OL.37.004693.
  45. Weilnboeck, Florian, Elliot Bartis, Sivan Shachar, Gottlieb S. Oehrlein, David Farber, Tom Lii, and Chet Lenox, "Differences in Erosion Mechanism and Selectivity between Ti and TiN in Fluorocarbon Plasmas for Dielectric Etch," J. Vac. Sci. Technol. B 30, 041811 (2012), doi: 10.1116/1.4736979.
  46. Xia, Jinan, Andrea M. Rossi, and Thomas E. Murphy, "Laser-Written Nanoporous Silicon Ridge Waveguide for Highly Sensitive Optical Sensors," Optics Lett. 37, 256 (2012), doi: 10.1364/OL.37.000256.
  47. Yeh, Jen-Hao, Thomas M. Antonsen, Edward Ott, and Steven M. Anlage, "First-Principles Model of Time-Dependent Variations in Transmission through a Fluctuating Scattering Environment," Phys. Rev. E 85, 015202 (2012), doi: 10.1103/PhysRevE.85.015202.
  48. Yoon, Young-Noh, Brian R. Hunt, Edward Ott, and Istvan Szunyogh, "Simultaneous Global and Limited-Area Ensemble Data Assimilation Using Joint States," Tellus Ser. A - Dynamic Meteor. Ocean. 64, 18407 (2012), doi: 10.3402/tellusa.v64i0.18407.
  49. Zamora-Munt, Jordi and Edward Ott, "Double Transition to Synchronization:  A Generic Emergent Transitional Behavior in Large Systems of Coupled Oscillators," EPS 98, 40007 (2012), doi: 10.1209/0295-5075/98/40007.
  50. Zhang, H.D., R.B. Fiorito, A.G. Shkvarunets, R.A. Kishek, and C.P. Welsch, "Beam Halo Imaging with a Digital Optical Mask," Phys. Rev. ST Accel. Beams 15, 072803 (2012), doi: 10.1103/PhysRevSTAB.15.072803.

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